rs51034478 SNP Detail

Summary

• ID
  rs51034478
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:118172935 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTCCGAT CTCTTTGAAG
  CCTAGAAACC TTCCTGCTTC AAAGCCTGCG ATGTTCCGTT GGCCCCAGCG TCTGCTGCCT
  TCACACTGGC ACCTGTCTTT GGAAACTTAG AGGAAGGCGG GAACAGGCAG GAAATTGTTT
  GGGAATAGCA GATCTTTTTC ATAGTTTGTA TTCAATACTA TTGGTTTTGG AATTATAAGA
  M
  CAAAATGCCA CAGGTAGAGG TGTGTGTGTG TGTGTGTGTT TGTGTGCTCC ACCTTGAGTG
  ACTGTTGCCC ACTATTAATA GATGTGGGGA AAGCACGTCG TGACTAAGCA CCATCACTCA
  CTCCACTGTG CAGTTTCAAT GTGTAACTGA GTTACCCTCA GCTTTGGGCT GTTCGAGGAG
  GATGACCAGA CCAGCAGACC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61231096	NES16848762	PERLEGEN	MM_PANEL2	f	SNP	A	A	C	A	A	A	A	A	A	A	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51034478					SNP	A	A	C	A	A	A	A	A	A	A	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61231096	NES16848762	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:118172935 () rs orientation: forward

Symbol	Name	Function Class
Gm33088	predicted gene, 33088	165 bp upstream