rs51036715 SNP Detail

Summary

• ID
  rs51036715
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:3769406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCACCGCAT AGGAAGCAAG
  TTTGTGCCTT ACCTGCCAGG CAGCATAACT TGTCCCTGTA AAGGGATCAC TCCGGTGGAG
  CGATGGTTCA GAGATGCTGT TCCAGAGAAC CTGAGTTTGG TTCTTAGCAC TCGCACCCAC
  ATGCAATGGC TCACAAGTGT CTCCAACTCC AGCTGTAGGG GATCTGATGC CATCTACCCA
  S
  TGTGGGCACT TGTACACCCG CGGCATACCC TCAGACACAG ACATGTACAC ATGAAAATAC
  ATCACTCACC ACTGGACAGT AGGGTGCTCA GAATGAGAGC CCATAGAACT GTGGCCACCA
  GCAGAGCCAA GACCAGGAAG AAAAGTCTTT GTTTGTAGCA CTCCCAACGT CCCAATTGCC
  CTAGTAGAAC ACAGATAAAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148548833	ENSMUSSNP1090660	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51036715					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:3769406 () rs orientation: forward

Symbol	Name	Function Class
Clec4g	C-type lectin domain family 4, member g	within coordinates
Cpgi20034	CpG island 20034	506 bp distal
Gm16553	predicted gene 16553	within coordinates
Rr400747	regulatory region 400747	537 bp downstream
Rr658970	regulatory region 658970	786 bp distal
Rr658971	regulatory region 658971	665 bp distal
Tssr80223	transcription start site region 80223	1848 bp upstream
Tssr80224	transcription start site region 80224	1824 bp upstream
Tssr80225	transcription start site region 80225	1234 bp downstream
Tssr80226	transcription start site region 80226	1392 bp downstream