rs51037570 SNP Detail

Summary

• ID
  rs51037570
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135762621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTTTCAGGC ATCCATGAAT CTGGCTATGG
  CCTGTTTGAA AGGTTATCAG CTCTCTTGGA AAGTAGTTTA AGTTCCGGGA GGATTTAGGA
  AAAATAACTT GTAAATTCCC GGAGATTCTA GACTGAGATA CAATGCAAAA GCTGGGTGGG
  R
  CTTTGGTGGG CTAGGGTGGT AAGGGGAAGC ATTCTGTTTG GCTCTTTATG AGGTCAGTCT
  GGCTTCTGCA CCCATCATCC CTCTGAGTCT TCTCCCTCCC TTTCCCAAGC CCCCCAGATT
  TCCTGAGCCC CCCCTTTCAT GGGATGTTAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss145547940	ENSMUSSNP2510449	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss319993815	CHEV_1_137731460	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs51037570					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135762621 () rs orientation: forward

Symbol	Name	Function Class
Lad1	ladinin	1542 bp downstream
Rr419292	regulatory region 419292	20 bp distal
Rr419293	regulatory region 419293	456 bp distal
Rr419294	regulatory region 419294	981 bp proximal
Rr419295	regulatory region 419295	1541 bp proximal
Tnnt2	troponin T2, cardiac	1471 bp upstream
Tssr9005	transcription start site region 9005	1497 bp upstream