rs51039371 SNP Detail

Summary

• ID
  rs51039371
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48916403 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGGGTACC AAATTTGTGT
  CCTCTGGAAG AGCAACTAGG GCTCCTAACC ACTGAGTAAT CTTTTCAGTC TTGTGACTCT
  TGAGTCTCAG CTTGAGAGGT TTCAACTAGG TGAGGGATCC CTTCCTCATC GTTTTCCTTG
  TCCCTTCATC ATACCCCAGG CAGATGATCC ATGAGGCAGG TGGCCCATCT CTGTCAGGTC
  M
  CTCTATGTCC CTGACTGCTT TGGGGAACTG CCTTTGCCCT CTGGGTCACT GATGCTTTCT
  GTGGGGGCTG TAAAACAGAG CATGCGATCT GTGAAGGACA CACCCAGGCA TCAACGACAT
  GGTTGCTCCT CACATCCTTG GGTTCTCGGC TACAGAACCA GCTGCACAAA GGCTTGGGAC
  TTGGTGCTCC ACCGACAACG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145720291	ENSMUSSNP6497848	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51039371					SNP	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48916403 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9295	CpG island 9295	1687 bp proximal