rs51043917 SNP Detail

Summary

• ID
  rs51043917
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130730682 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGTTTTGTG TGTTGTATAT AGTTCTCTGG TCTCATGCCA
  GTCATTCACC CTGCAGAAAG CATTTATTAG AAGCTGACTC TGTGTTAGGA AGTCTGGTGG
  Y
  CTTTGATCTT CAACCAAGGA GCCGTTATGG GAGAAACTGC CACACAGAAG ATTCAAGAGT
  TGACTTGAAA TCCCCAGTTC TTTGCAATGG GTAGCACAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss135902535	ENSMUSSNP1784116	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51043917					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130730682 () rs orientation: forward

Symbol	Name	Function Class
2010110G14Rik	RIKEN cDNA 2010110G14 gene	within coordinates
Gm64594	predicted gene, 64594	127 bp downstream
Gm64601	predicted gene, 64601	636 bp upstream
Rr367556	regulatory region 367556	within coordinates
Rr585239	regulatory region 585239	1195 bp distal
Rr585240	regulatory region 585240	290 bp distal
Rr585241	regulatory region 585241	16 bp proximal
Tssr31681	transcription start site region 31681	432 bp downstream