rs51044524 SNP Detail

Summary

• ID
  rs51044524
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:134294427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTG GGATTTGAAC TCAGGACCTT
  T
  GGAAGAGCAG TCAGTGCTCT TACCC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss144502799	ENSMUSSNP3063418	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs51044524					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:134294427 () rs orientation: forward

Symbol	Name	Function Class
Gm43481	predicted gene 43481	1492 bp downstream
Gtf2i	general transcription factor II I	within coordinates
Tssr53619	transcription start site region 53619	1140 bp upstream
Tssr53620	transcription start site region 53620	504 bp downstream
Tssr53621	transcription start site region 53621	1011 bp downstream