rs51045799 SNP Detail

Summary

• ID
  rs51045799
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127818692 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAAATCAAT AAGATCATAG
  GTGCATGGCA GTTTGCACTC AGGATCAAGC AGGATCAAGC TGACAGAGGT ATCTGAAGTG
  GCAATTTCTG GTTTCTTTGT AACTCAGTTG TAGCCTGTGA TTTTTTCTGG CCGCTGTCTT
  GTTCTCGAGA AGGCAGTGAT GCTTTGCTGA GAGCAGACAC CTGAGAGGTT GCTTGATGTT
  K
  AGAAAGAACA TAAACAAAAC CCCACAGACA ATGAGAGGGC GCTCAAGTAT TTTTCCTTTA
  AATGTCCCCT TTGCTCTCTT TTTAAACTCC TAAGTACCTG TAACAGGAGA ACATTAAACA
  TAGAAAACAT ACAAAACAGA CATGTAAAGG AACTCAGAAA ATGATGATAG CAGATTGTTA
  CAGAAACAGT AAGAGTATTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145887654	ENSMUSSNP1367001	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51045799					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127818692 () rs orientation: forward

Symbol	Name	Function Class
Gm44850	predicted gene 44850	within coordinates
Itgad	integrin, alpha D	within coordinates
Tssr75086	transcription start site region 75086	1348 bp downstream
Tssr75087	transcription start site region 75087	1370 bp downstream