rs51048931 SNP Detail

Summary

• ID
  rs51048931
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121503060 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAGCATGC TAACAGCACT
  TTTCACCCAT GAGGTTCCAG ATGCCCATCA TCCATTGTGC TTGGCACAAT GCAAAGCAGG
  AAACAATAAC AAACAACAAA AACCCTAAGG TTTAATTACA GAAGCAATTC CTCCAAGGTT
  ATCTCGGGAC ATGCAAAATT GGGATTTGAA TTTTGGGGTG TCTGTCTCAA AAACCCATAC
  Y
  GTTCCCACTG AGTCTCGCCA GCTGAAATCT GCAGCCATGA GTTGTTTGCC GGGTCCTTTC
  AGGTCCTTGC CCTGCGTCTA GATTTGAATT CACACTGGCA TCCGTGGCTG AGGAGCAAAT
  GACTTAGATG ACAGGCATGG CATGAGTGAT AACTCGGATA CCCATGGCTG CCTCCAGGGT
  TAGAAAGAAA GCAAAGTCGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135727201	ENSMUSSNP43443	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51048931					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121503060 () rs orientation: forward

Symbol	Name	Function Class
D3Mit288	DNA segment, Chr 3, Massachusetts Institute of Technology 288	572 bp distal
Gm43607	predicted gene 43607	1845 bp downstream
Gm43608	predicted gene 43608	within coordinates