rs51049036 SNP Detail

Summary

• ID
  rs51049036
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:138798540 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAGC TAAGATCAAA AGTACACTAG
  R
  TATATGAAAA CCCAGCCACA TGTTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145976047	ENSMUSSNP4975419	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51049036					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:138798540 () rs orientation: forward

Symbol	Name	Function Class
Gm73028	predicted gene, 73028	1749 bp upstream
Lrrc27	leucine rich repeat containing 27	Intron
Rr657516	regulatory region 657516	1870 bp distal
Rr657517	regulatory region 657517	1508 bp distal
Rr657518	regulatory region 657518	502 bp proximal
Rr657519	regulatory region 657519	1605 bp proximal
Tssr69706	transcription start site region 69706	1950 bp upstream