rs51049676 SNP Detail

Summary

• ID
  rs51049676
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:71368174 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAGTTGT GCTCATTATA
  AAAACAGAAC TAGCCAAATA ATACTTAAAT AATGACAAAA ACAAACTTCT TCAATTCTTT
  CTCAATCCTG CACTTGGGGG ATGTGTATCT CCATAAAAAC TGTTATATGC AATGTACATA
  TACTAATACC CTTGGCCCTT TTTCATGAAA ATGAAGTTTC CAACCTTGTG TTTTATTTTA
  Y
  CATATGCATC TTTCATTTTG TGGATCTCTA TGACAGATGT CCCACTTCTG TCCAACGGCC
  TGGTGACTTG AGATGTCCTC CACAGTCTCA AGCACTTGGA TGCTTTGTCC CCAGTTGACG
  TCACTGTCTT TGAGGGTTCA AGACCCGCAC CATTCCAAGT TTACTCTCCC TCTGCTTTTT
  GCTTGTGGTT TGAGGGGAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52444348	NES15422780	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51049676					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52444348	NES15422780	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:71368174 () rs orientation: forward

Symbol	Name	Function Class
4930474H06Rik	RIKEN cDNA 4930474H06 gene	within coordinates
Dact1	dishevelled-binding antagonist of beta-catenin 1	1293 bp downstream
Rr267972	regulatory region 267972	1027 bp proximal