rs51050707 SNP Detail

Summary

• ID
  rs51050707
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:75902441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T ACAAAGCAAG TTGCAATAAT GTTAAAATAC TTTATATGTT
  TTCTACATTC ACAAAATAAA CAGGTGTTTT TATTTCTATT ATAAGTTGCA ACTCAAAGGG
  G
  AAAAAAAAGC ACATAATAAA GTTAGTTTTT CAAGGACAAT ACTAATAAGA TAGGTTGAAC
  ACTTTCACAT ATCTCCTGAC CATTTGTTAA ACCGACACCA C                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146574600	ENSMUSSNP2502985	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51050707					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:75902441 () rs orientation: forward

Symbol	Name	Function Class
Ptprd	protein tyrosine phosphatase receptor type D	within coordinates
Rr94872	regulatory region 94872	241 bp distal
Tssr42151	transcription start site region 42151	1416 bp upstream