rs51056106 SNP Detail

Summary

• ID
  rs51056106
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:38752125 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGGCGCAC CCTCTCACCT
  GTTCAGACTA ATTTCCTAAG TTCGGCGGGT CCCGGACCCT CCCTTTTAAT TCTTTTGCCT
  GCCCTAGATA ATCTCCTTAG TGGCAGCGAG GTCGAGTTCT AGCTTAGCCT GCTTCAGGTT
  TGTGGGAGTG TACATCTCTC ACTAATACAA TGAACAGACA TGCACACTTT AGACTTCAAA
  R
  CTAGCAATGA AAGGAAGTTA AAACACTTAG TGAATGTGTT TTTTTTTAAT AGAGGCATTT
  TCTACATACC ATGAAAATAA CAAATGCATT GAGCATATGT CACCACAACA AGAAGACATT
  CACTTATCAA AGAAAAAGAA CACGTAAAAA GAGCTATTAG AGTCACAGTA GTTTCTATCC
  AAACACCAGT CTCTGCTTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61383793	NES16763890	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51056106					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61383793	NES16763890	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:38752125 () rs orientation: forward

Symbol	Name	Function Class
Rr383232	regulatory region 383232	1586 bp upstream