rs51056246 SNP Detail

Summary

• ID
  rs51056246
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:192923057 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTGT TCCAGAGCTC TGTGTGTGTG
  K
  GGGGGGGGAG TGTCTAGTAT TCTCA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146525860	ENSMUSSNP1703386	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51056246					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:192923057 () rs orientation: forward

Symbol	Name	Function Class
1600010F14Rik	RIKEN cDNA 1600010F14 gene	within coordinates
D1Mit512	DNA Segment, Chr 1 Massachusetts Institute of Technology 512	437 bp proximal
Hsd11b1	hydroxysteroid 11-beta dehydrogenase 1	within coordinates
Rr372662	regulatory region 372662	1807 bp upstream
Rr426486	regulatory region 426486	1492 bp proximal
Rr426487	regulatory region 426487	1870 bp proximal
Tssr15848	transcription start site region 15848	758 bp downstream
Tssr15849	transcription start site region 15849	1597 bp downstream
Tssr15850	transcription start site region 15850	1677 bp downstream