rs51064258 SNP Detail

Summary

• ID
  rs51064258
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:56350033 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CTATTTCCCA TTTTCTGAGG AACCACCAGA TTGATTTCCA
  GAAGGGTTGT ACCAGCTTGC AATCCCACCA GCAATGCAGG AGTGTTCCTC TTTCTTCACA
  W
  CCTCGCCAGC ATCTGCTGTT GCCTGAGTTT TTGATCTTAG CCATTCTGAC TGGTGTGAGA
  TGGAATCTCA GGGTCTTTTT GACTTGCATT TCCCTGATGA C                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137604093	ENSMUSSNP3396852	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51064258					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:56350033 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2905	CpG island 2905	55 bp proximal
Gm12241	predicted gene 12241	142 bp upstream
Gm74456	predicted gene, 74456	254 bp upstream
Rr447663	regulatory region 447663	158 bp proximal
Rr447664	regulatory region 447664	272 bp proximal
Tssr108109	transcription start site region 108109	152 bp downstream