rs51067584 SNP Detail

Summary

• ID
  rs51067584
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:44235819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCGACGTCT GAAGGAGAGT
  TTGCTGTTGT GGTGTGAAAG AGTGGGATCC TGATTAGAAC TGGGAGGTCT TCTAGGACTT
  TATAGAGCAG AGGTTTGCAG CCTGTGACAC TCAGCTCATG GAGACCTAGG TGGCCTTGGG
  TTCTGAGCAC CAGACAGGAC TTGGAATATG TCTCAGTCAT CCGTCAGCCT TCACTGCATT
  R
  CCAACCCAGC CTCCTCAGGA AATGTGAAGA GAGGGTGTGT TGTCTTCTCT TGACGTGTGC
  AGCATGTCTG AGAATGCATG TCACTGAGGT TCATTGAGAA GGGCAGCAGA GGACCAGCCA
  GCCTGTTTGT TTTTCTTCCA TTAACCTTCC TCGTGCTGTG GTGGTGGATC AGAGTGTGAA
  CTAGGACCCT ATATGCAACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss52251147	NES15310128	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs51067584					SNP	G	G	G	G	G	G	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52251147	NES15310128	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:44235819 () rs orientation: forward

Symbol	Name	Function Class
Atg5	autophagy related 5	within coordinates
Mir1929	microRNA 1929	55 bp downstream
Rr227725	regulatory region 227725	1620 bp distal
Tssr93169	transcription start site region 93169	1425 bp downstream