rs51068755 SNP Detail

Summary

• ID
  rs51068755
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:79753748 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TTTATTTTTT AGCTCTGACT CATGACATAT AATGTATTCC
  ACCAAGTTCA AAGTTTCCCC TTACAAAGAG TTTTATGAAA CAGCTCTTCT TCAGACCAAA
  T
  TTTTTTTTTT TTTTACTTCA ATTATAGTAG CAGATTTTGG AGTTTTAAAT CATTAACAAC
  CTCCCAGTGA ACTTGTATCC ACATGGCTTA CAGTCAGAGA G                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145238219	ENSMUSSNP1503682	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51068755					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:79753748 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20619	CpG island 20619	783 bp proximal
Cpgi20620	CpG island 20620	1568 bp proximal
Gm63940	predicted gene, 63940	within coordinates
Rr400985	regulatory region 400985	1187 bp upstream
Rr665783	regulatory region 665783	781 bp distal
Rr665784	regulatory region 665784	828 bp proximal
Rr665785	regulatory region 665785	1489 bp proximal
Tssr2612	transcription start site region 2612	1232 bp upstream
Tssr78123	transcription start site region 78123	850 bp upstream
Tssr78124	transcription start site region 78124	1059 bp upstream
Tssr78125	transcription start site region 78125	1134 bp upstream
Tssr78126	transcription start site region 78126	1198 bp upstream
Tssr78127	transcription start site region 78127	1446 bp upstream
Tssr78128	transcription start site region 78128	1510 bp upstream
Zfp827	zinc finger protein 827	1318 bp upstream