rs51069814 SNP Detail

Summary

• ID
  rs51069814
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:115953301 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAACTATTT TTACCACAGG
  CAATACCACC CACCCAGTCC GCCTTGAGAG GAGGATTTCA CACGGTAAAA AAAATAGAGA
  TAATTCAGGA AAGAGCATCC TTCTAAATTA GTTGTAATTT CACGTTCAAT GCAATGTGAT
  AAAGAAACAG GGATGAGCCA GCTAAAATCT ATGTATGCAT CTGTCAAGCA GTTATAAAAC
  Y
  GCCTCAGCGA TAACACATAG ATTCACATTA TTCACCGCGT GAAGGCAGAG CTTGTGCACT
  TTTGCTGATA TTTCAAACAA ATGTTGGTAG TTTAATGAAT AGGTGATGTA TTTTTCTTTT
  TGAGAGAGAG AGAGAGAGAG ATGAATACTC AAGTGTATGC ATGCTGATGC CAGAGGAAAA
  ATTAGGGTGT CTTCCTCTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61318577	NES16925608	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51069814					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61318577	NES16925608	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:115953301 () rs orientation: forward

Symbol	Name	Function Class
Ptprr	protein tyrosine phosphatase receptor type R	within coordinates
Rr221625	regulatory region 221625	956 bp distal