rs51076209 SNP Detail

Summary

• ID
  rs51076209
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:64440911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTATTTTCA AAACTGATAG
  CAATTTCAGG AATTGGAAAT ACAAGTGAGG GATTGAATTA CCTAAAAAGC ATTCAAATGG
  GTCCAATACA AGTATGCTTC ACAAACTATT TTAGAGCTGG AATAATACAC AAATGGAATA
  GGAAACCAAA CAGTATGATG TTGATTCTGA TTATGACGGT AAATTTCCTT TTCATCTTAA
  Y
  AAGGTGTTTT ATAGTTTTCA GTTTCTTATG CATGCAATAG ACTAGGATAG CAGTTCTTTG
  GTGCCTATGG CATAAATGTA TACCATGCTC ATAAAGAACT ATCTTCAATA AAGCTGAGAG
  AGTAATGTTA TGTAAAACAA CCAAAGCCAT AAGCAGAACA TATGTCCTTG TGTACCTTCT
  TTCTCAGCAA AAGTGGATAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss133262256	ENSMUSSNP4054311	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51076209					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:64440911 () rs orientation: forward

Symbol	Name	Function Class
D6Rck360	DNA segment, Chr 6, Rockefeller University 360	1886 bp proximal
Grid2	glutamate receptor, ionotropic, delta 2	Intron
Rr379493	regulatory region 379493	314 bp upstream