rs51083560 SNP Detail

Summary

• ID
  rs51083560
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:23626822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTATCTTCTC CCTTCTTCAG TGTAAATTGT CTTCTGAAGC
  CAACATGAAT CATTACTTCT TTTTGAAGAC AAAAGTTTAA ATCAAATAGG TTAATTTTTT
  K
  CTTTCATCTC AAAGGAATGA CTATTTTCTA GATTAGCACT CAGCAAAACA CAGCATTCAG
  TGTAATGTAT ATGAGATGTT GAATTTTATC TGGTGGATGG                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss60978313	NES16145467	PERLEGEN	MM_PANEL2	f	SNP	G	T	T	G	G	T	T	T	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs51083560					SNP	G	T	T	G	G	T	T	T	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60978313	NES16145467	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:23626822 () rs orientation: forward

Symbol	Name	Function Class
Vmn1r179	vomeronasal 1 receptor 179	989 bp upstream