rs51089094 SNP Detail

Summary

• ID
  rs51089094
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:73285994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAACAAAAT AGTGTTTTTA
  GAAAGCTCAT AAAACAGGCA GGTGTGGTGG CGCACGCCTT TTATCCCAGC ACTTGGGAGG
  CAGAAGCAGG TGGATCTCTG ATTTCAAGAC TAGTTTGGTC TACAGAGCGA GTTTCAGGAC
  ATTCAGGGCT ACACAGAGCA ACCCTGTCTC AGCCCCACCC TCCAAACAAT TCTTTGACCA
  Y
  ATAATTCTCA GATTGCCTTA ATATCCTTGT TTCCAGAAAT AAAATCTGCT TTAAAACAGC
  TTTGAATGGA TCGCAGCCAA GATACAAACC CTGCAGATGT GTCAGACAGC TGCCTATTTT
  GAGGATACTG TCAAACTTGC ACCAACGGGG GCCATCATCA GTAAACTACA GCACCAGAAA
  CCCATGGGGG GGCCTCGTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61019820	NES16103701	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51089094					SNP	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61019820	NES16103701	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:73285994 () rs orientation: forward

Symbol	Name	Function Class
Gm44737	predicted gene 44737	within coordinates
Rr171673	regulatory region 171673	within coordinates