rs51089772 SNP Detail

Summary

• ID
  rs51089772
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33151836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGTGCCCA GGTCCAAGAT
  ATTCACAGCC TTCAAAAACA GTGCCAACGG ATTCGGTAAT CAAACACACA TGTGGGAGAC
  GTTTCAGGGA CTGAGGGCAC ACAGGGATGA TGTCGGGGGA GATGGTATGT GTGGAGAATC
  TCTCCGTGCC CATTAGCAGA GCACATCTGT CCTGTAATGC TGACAGTGCC TAGCAGCACC
  R
  CTTTATGTTG CTATGACAAT GTATGAGAGC TCCTATTCCT CCACACACTT GGGAGGACTC
  CTCAATTCCC GTGGGTCGCT TCTCCCTCTA ACTGTTTATC AGTCATCAAA TATTACATAT
  TTGTTAAACT AATCATTTTC TTACAGTCTG CATTTTACAT CTCCCATAAA CATGCCCCTA
  TGACCTGTAA TCTCTTCAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137582091	ENSMUSSNP3506827	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51089772					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33151836 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	876 bp upstream
Rr464869	regulatory region 464869	386 bp proximal
Rr464870	regulatory region 464870	887 bp proximal