rs51091175 SNP Detail

Summary

• ID
  rs51091175
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:127685596 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCTGTGAA CTCTTGCCTT
  ACCAAGAGTT CAAATATACA CTTGAGGGAG AAGCTGTTAA ATGGCTTCCT TACATACATC
  TATTACTGAT CTATTAGTAC TATCCTAAAG GGCCATTATA GTGAATGATA TGGGTTAGTG
  CACTTGTATT CCCTCTATTT CTCTGCCAAA CCGTGGTCTG TGGTCATAGC ACTGCACCAC
  S
  TGAGACTCTG GTAAGAGATG TCAAGGGTCA GACCCTTACT GAAAATTAGC TACATCAAAA
  TCTTTGTTAG CCAGAGATGA CAGGTCATGC ACGTTAGCTG AGAGTGCTGC CACAGCCGCC
  CTCCGCCTGG TCTCTCGGTT AACTGTGGGT GTGAAAAACC TTAAAGACTA CTTGTCACAT
  TTCTTCTCAG TTCCGGTTTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135874364	ENSMUSSNP4367366	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51091175					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127685596 () rs orientation: forward

Symbol	Name	Function Class
Fam241a	family with sequence similarity 241, member A	Intron
Rr584893	regulatory region 584893	1626 bp distal
Rr584894	regulatory region 584894	234 bp distal
Rr584895	regulatory region 584895	1393 bp proximal