rs51102281 SNP Detail

Summary

• ID
  rs51102281
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34923051 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGATTGTGAC ATGTCATTGT GAAATAAACG TTTTGTTCTT
  TAAAAATAAG GAAACATTGT TAATTTTATT ATATATATAT AATATATGCT TATGAAAAAC
  A
  TAGTTAAATA GTTACCACCA TTGTTCTCAA ATCTTAGTCT ACTGGTATAT TCTTTCATTC
  TTGATTTGTG TGTGTGTGTA GAAGACTGTA TATTTATTC                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss149109282	ENSMUSSNP3859069	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs51102281					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34923051 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20247	CpG island 20247	195 bp distal
Gm39159	predicted gene, 39159	61 bp downstream
Gm45349	predicted gene 45349	within coordinates
Gm46038	predicted gene, 46038	1021 bp upstream
Rr400818	regulatory region 400818	268 bp downstream