rs51102862 SNP Detail

Summary

• ID
  rs51102862
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:130537336 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGG AAGGCTAGGG ATGCAGCTCG
  A
  TGTGTAGAAT ATGTGCCTAA CCTGC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147597295	ENSMUSSNP3506655	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51102862					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:130537336 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12275	CpG island 12275	1098 bp proximal
Rr373865	regulatory region 373865	within coordinates
Rr565122	regulatory region 565122	1092 bp proximal
Slc4a11	solute carrier family 4, sodium bicarbonate transporter-like, member 11	within coordinates