rs51106668 SNP Detail

Summary

• ID
  rs51106668
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55204783 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTC CATTCTATTT TCCATGGTCC
  Y
  TGAGATGCAG GCCATCATCC AATCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss52723020	NES15567932	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T		C	T	T	T		T
ss139574330	ENSMUSSNP3411797	ENSEMBL	ENSEMBL_Sanger	f	SNP		T						T
ss324641224	CHEV_14_55586163	CHEVERUD	SCREENING_POP	f	SNP											T					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs51106668					SNP	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52723020	NES15567932	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55204783 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	1432 bp upstream
Myh6	myosin, heavy polypeptide 6, cardiac muscle, alpha	399 bp upstream
Rr407057	regulatory region 407057	within coordinates
Rr492378	regulatory region 492378	732 bp distal
Rr492379	regulatory region 492379	195 bp distal
Rr492380	regulatory region 492380	909 bp proximal
Tssr4419	transcription start site region 4419	1024 bp upstream
Tssr4420	transcription start site region 4420	911 bp upstream
Tssr4421	transcription start site region 4421	905 bp upstream
Tssr4422	transcription start site region 4422	853 bp upstream
Tssr4423	transcription start site region 4423	827 bp upstream
Tssr4424	transcription start site region 4424	789 bp upstream
Tssr4425	transcription start site region 4425	676 bp upstream
Tssr125718	transcription start site region 125718	1346 bp upstream
Tssr125719	transcription start site region 125719	1425 bp upstream
Tssr125720	transcription start site region 125720	1455 bp upstream
Tssr125721	transcription start site region 125721	1475 bp upstream
Tssr125722	transcription start site region 125722	1900 bp upstream
Tssr125723	transcription start site region 125723	1969 bp upstream
Tssr125724	transcription start site region 125724	1981 bp upstream
Tssr128733	transcription start site region 128733	1995 bp upstream
Tssr128734	transcription start site region 128734	1967 bp upstream
Tssr128735	transcription start site region 128735	1924 bp upstream
Tssr128736	transcription start site region 128736	1892 bp upstream
Tssr128737	transcription start site region 128737	1865 bp upstream
Tssr128738	transcription start site region 128738	1853 bp upstream
Tssr128739	transcription start site region 128739	1502 bp upstream
Tssr128740	transcription start site region 128740	1432 bp upstream
Tssr128741	transcription start site region 128741	1359 bp upstream
Tssr128742	transcription start site region 128742	741 bp upstream
Tssr128743	transcription start site region 128743	718 bp upstream
Tssr128744	transcription start site region 128744	389 bp upstream
Tssr128745	transcription start site region 128745	104 bp upstream
Tssr128746	transcription start site region 128746	626 bp downstream
Tssr128747	transcription start site region 128747	655 bp downstream
Tssr128748	transcription start site region 128748	674 bp downstream
Tssr128749	transcription start site region 128749	737 bp downstream
Tssr128750	transcription start site region 128750	756 bp downstream
Tssr128751	transcription start site region 128751	773 bp downstream
Tssr128752	transcription start site region 128752	826 bp downstream
Tssr128753	transcription start site region 128753	1015 bp downstream
Tssr128754	transcription start site region 128754	1094 bp downstream