rs51107430 SNP Detail

Summary

• ID
  rs51107430
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:128552618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTATAACC CTGGCTGAGA TTAAAGGCGT GTGCTTCCAC
  CGCCCAGCTA GTAAGGTGAG CTTTAAACTC ATCTACAAAA CGTTTGCAAA GCCCAACTGC
  R
  CAGGGCAGCC CAGGACCTAT GGACTCTGCC TTTGGGAGTG GGACTTGCCC TGTCTGGCCA
  TGCTAGAGCC AGTATGTCTA AAGTCTGATA CTTGCAAAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147568475	ENSMUSSNP3516391	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51107430					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:128552618 () rs orientation: forward

Symbol	Name	Function Class
D2Mit305	DNA segment, Chr 2, Massachusetts Institute of Technology 305	1455 bp distal
D2Mit305.1	DNA segment, Chr 2, Massachusetts Institute of Technology 305.1	1568 bp distal
Mertk	MER proto-oncogene tyrosine kinase	within coordinates
Rr1768	regulatory region 1768	1477 bp upstream
Rr38265	regulatory region 38265	1983 bp proximal
Rr58326	regulatory region 58326	within coordinates
Tssr20064	transcription start site region 20064	1964 bp downstream
Tssr20065	transcription start site region 20065	1915 bp downstream
Tssr20066	transcription start site region 20066	1633 bp downstream
Tssr20067	transcription start site region 20067	1591 bp downstream