rs51111669 SNP Detail

Summary

• ID
  rs51111669
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:40692306 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTC ACAGCATGCG AGGGTTGCTG
  A
  GTGTGGTCTG GAAGCCACCC TGTCC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136338101	ENSMUSSNP6551261	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51111669					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:40692306 () rs orientation: forward

Symbol	Name	Function Class
Clmp	CXADR-like membrane protein	within coordinates
Cpgi21601	CpG island 21601	1241 bp proximal
Gm16096	predicted gene 16096	within coordinates
Tssr84467	transcription start site region 84467	645 bp downstream
Tssr84468	transcription start site region 84468	66 bp upstream
Tssr84469	transcription start site region 84469	118 bp upstream
Tssr84470	transcription start site region 84470	1267 bp upstream
Tssr84471	transcription start site region 84471	1394 bp upstream