rs51112279 SNP Detail

Summary

• ID
  rs51112279
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:103912427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCAGTTAAG TAAGGACCAG TAGAGAAAAT TGTTTTAAAA
  ATAGGAGTAT CTGATGATTT CTATGTAAAT TCCTGGTGTG TAGCTGAAAA TCTAGGCTTT
  C
  TGTTCAAAGT GTTGGATTCC ATGGGGCAGA GGAGGAGGGC ACATTGAAGA GCATGTGAAT
  TCACTGCTAA GGTAGAAAAT GTAGAATTCC ACCCCTGGG                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147142907	ENSMUSSNP1974797	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51112279					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103912427 () rs orientation: forward

Symbol	Name	Function Class
Cd59b	CD59b antigen	Intron
Rr562021	regulatory region 562021	115 bp distal
Rr562022	regulatory region 562022	469 bp proximal
Rr562023	regulatory region 562023	1940 bp proximal