rs51113792 SNP Detail

Summary

• ID
  rs51113792
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:92033191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTAAATACT TGAATACTTA CAGGAAGGTT AGCACTTAGA
  AACATAGATT ACATTAAAAA GAAAGGCCCA GATTTAATAA TATAAAGACC AGTCATCTGA
  R
  GAATGAGAAA TGACTTTTCA CAGATATTGA TAGTGCTTTC AAGCGCTTGA CATCATGATG
  CTCAGGTAAA CTTTGTCAGA GAATATAGGA CTGCACGTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145568319	ENSMUSSNP5279294	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss322790931	CHEV_8_93830462	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51113792					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:92033191 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm45428	predicted gene 45428			within coordinates
Rpgrip1l	Rpgrip1-like			Intron
				Noncoding-Transcript-Variant
Rr382458	regulatory region 382458			1216 bp downstream
Rr406224	regulatory region 406224			278 bp distal
Rr407238	regulatory region 407238			1188 bp distal
Rr667510	regulatory region 667510			1601 bp distal