rs51114589 SNP Detail

Summary

• ID
  rs51114589
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:90884789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAA CAATGTATCT TCCCTAGCTG
  W
  CAGCAAAGCA GTTGCCCAGC ATCAA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss144935003	ENSMUSSNP6104272	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss319838446	CHEV_1_92853644	CHEVERUD	SCREENING_POP	f	SNP		A	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs51114589					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:90884789 () rs orientation: forward

Symbol	Name	Function Class
Rab17	RAB17, member RAS oncogene family	1066 bp downstream
Rr415504	regulatory region 415504	within coordinates
Rr415505	regulatory region 415505	164 bp distal
Rr415506	regulatory region 415506	17 bp distal