rs51116666 SNP Detail

Summary

• ID
  rs51116666
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:75149856 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAT CCCCTCTCTT TGTATCCTGG
  M
  TGGATAAAGA AATAGATAGG AGTCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147488230	ENSMUSSNP3201823	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51116666					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:75149856 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10229	CpG island 10229	1753 bp proximal
Dym	dymeclin	1996 bp upstream
Rr405742	regulatory region 405742	1669 bp upstream
Rr540715	regulatory region 540715	1506 bp proximal
Tssr151951	transcription start site region 151951	1906 bp upstream
Tssr151952	transcription start site region 151952	1924 bp upstream