rs51120827 SNP Detail

Summary

• ID
  rs51120827
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:25276032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TTTTGCTTCA CCTGTCAGTA ACACTCTGTG GCTGAAAGTC
  AGCGTCCCCA CATTCTTGAT ACGGCCGCTC TATCAGTGTC TCTGCCCTTT GTGCGTTGTG
  T
  TTGGACTTTA ATATGAGTAT TCCACTCGCT GGGAAGTCTG AAGAGCCATT GTGTAGCTGA
  GTGACATTGT GTCCGTTCTG TGTATTGTGC TTGAGAATAA A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146282406	ENSMUSSNP5379526	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51120827					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:25276032 () rs orientation: forward

Symbol	Name	Function Class
Kank1	KN motif and ankyrin repeat domains 1	within coordinates
Rr364351	regulatory region 364351	1833 bp distal
Rr364352	regulatory region 364352	1042 bp distal
Rr364353	regulatory region 364353	1770 bp proximal
Tssr155675	transcription start site region 155675	1902 bp upstream
Tssr155676	transcription start site region 155676	1918 bp upstream