rs51125039 SNP Detail

Summary

• ID
  rs51125039
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr16:11367026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ATGAACTCAA CATTCTCCTT TGTCCTACTA AGTGTTGGGA
  TTACAGGTGG ATGCTATTGT GCTTGGGACA TTTAAAAAAT GTGCTACTTT AAAATTAGAT
  R
  CTTATGTTTT ATATTTTTTA TATCTTTTTA TTTATGATAC CATTTCTGTG CCTCTCTTGT
  GGCAAATATC TTTATCCTTA ATTTTTCTGT GCAATTTTTA A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss147852302	ENSMUSSNP2775545	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs51125039					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:11367026 () rs orientation: forward

Symbol	Name	Function Class
5830487K18Rik	RIKEN cDNA 5830487K18 gene	580 bp upstream
Snx29	sorting nexin 29	Intron