rs51126426 SNP Detail

Summary

• ID
  rs51126426
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:88485000 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGCTGGTACT GAGCGGCGGA
  TGGGTACTGT TCCGGGACCT GCTTATACCA TCTAACAACA TGTTGTACAT AGTAGCCAAT
  GGTGTGGTCT TCCATCTGCT GGCCTCGTTG GCACTCGCGT CACACCTACG GACTATGCTG
  ACCGACCCAG GCTCTGTGCC CCTGGGTAAC CCGCCCGGGC CTGACACAGT GTCCTACTGT
  M
  CCGACTGCCA CTCTGCCATA CCGAGGACAG CTTGCCACTG TACAGTGTGC CAGCGCTGCA
  TCCGCAAGAA CGACCACCAC TGTCCGTGGA TTAACAACTG CATTGGTGAA GACAACCAGA
  AGTACTTCCT GCTTTTCACA ATGTACATTG GACTTACCTC GACCCACGTT CTGCTCCTGT
  TGGGCATCCC TGTCCTGTGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	NZW/LacJ	WSB/EiJ
ss63579235	NES17028514	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	NZW/LacJ	WSB/EiJ
rs51126426					SNP	A	A	A	A	A	A	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63579235	NES17028514	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:88485000 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7510	CpG island 7510	56 bp distal
Gm62180	predicted gene, 62180	within coordinates
Tssr132609	transcription start site region 132609	465 bp downstream
Tssr135809	transcription start site region 135809	584 bp upstream
Zdhhc25	zinc finger, DHHC domain containing 25	within coordinates