rs51130118 SNP Detail

Summary

• ID
  rs51130118
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:27836073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTAAAGAG GCTGGCAGCC
  CTCTGCCGGA TTTGTCACCG TTTTGGTGCT TGTAGGTCTT GACTGGTTCT GCCCATAGCC
  TCCTGACTCT TGCTTCCTCA TGTCATGAAC ATGAATCCCA CTGTTTCACT GGCTTCCTAC
  AGCTGCCCCT TGCTGCCACC AACCCTGCCA GGTTCCTTCC TCACACTGGC TTCATTCTTG
  W
  AATGAGCCTG CCGTTCTGCC AGCCACTGTC AGAGGCACTG GAGATAAAAC CATGAGGTGG
  GCTCCCAGTG GTTCTGATAG GTGGAGCATG TGGCAAACCT GCACACTGTG GGAGAGGGCC
  AGGAGCTGTG GGAACTGGGA AGCAGAGGAG GAGGGGCAAC AGGAAAGGGC TACTGAAAGG
  GTGACCAGGG ACAGCCTCAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148632130	ENSMUSSNP6930989	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51130118					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:27836073 () rs orientation: forward

Symbol	Name	Function Class
Fcgbpl1	Fc fragment of IgG binding protein like 1	within coordinates
Gm21925	predicted gene, 21925	within coordinates
Gm38976	predicted gene, 38976	within coordinates
Rr644170	regulatory region 644170	1083 bp proximal
Rr644171	regulatory region 644171	1164 bp proximal
Tssr65385	transcription start site region 65385	1590 bp downstream
Tssr65386	transcription start site region 65386	456 bp upstream
Tssr65387	transcription start site region 65387	785 bp upstream
Tssr65388	transcription start site region 65388	882 bp upstream
Tssr65389	transcription start site region 65389	938 bp upstream
Tssr71448	transcription start site region 71448	450 bp downstream
Tssr71449	transcription start site region 71449	460 bp downstream
Tssr71450	transcription start site region 71450	477 bp downstream
Tssr71451	transcription start site region 71451	870 bp downstream