rs51130319 SNP Detail

Summary

• ID
  rs51130319
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97149494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTCTAGAG ATGCAGCTTT
  GAAGGAGATT AAAGATCTAT TGCAGAAAGC AGAGCTCGGG AGAGGTTCCA AGGGAAGGGA
  AAACCCTCTA AACTGTTTGT CTAGGGGCTT TTTATAGGAT GGCAGGAACT AAAGAAAGAC
  GGAAGACATT TCTGTTATGG TTGGTTTATT CTCTGAATGT ATCACAAGTT GTGCCAATGG
  R
  GCCCCACACT CTGTGCGTGT CCTGCAGGGA GATGTTCACA GGCTGCATAC CTGTTGCTCT
  CACAGTTAGG GGAGTGGTCA CTCTTTGAAG CCCCTCTTCA TCTTTGGCTT GTTTGTGCGA
  TGTTGACCTT GTTGGCAGTT TGCCCCGGCT GCTGTGGCAG TGGCTGCAGC AACAGACCTT
  ACAGGTGGTG TGGTCTTGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss63609769	NES17041944	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A		G	A	A		G
ss325076434	CHEV_15_97082044	CHEVERUD	SCREENING_POP	f	SNP											A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs51130319					SNP	A	A	A	A	A	A	A	A	A	A	A	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63609769	NES17041944	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97149494 () rs orientation: forward

Symbol	Name	Function Class
Pced1b	PC-esterase domain containing 1B	within coordinates
Rr308785	regulatory region 308785	1694 bp distal
Rr308786	regulatory region 308786	within coordinates