rs51130482 SNP Detail

Summary

• ID
  rs51130482
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:52866015 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGAAGCTC TCTAGGAAGA
  GGCCTGTTAA TAATTTACCC AGGATGCACT GCAGACCGGC AGGTGGCTGT AAGCGGCAAC
  AAATGTCAGC CATGTGCCCT GAAGGCACAA CTGCCTGCCA GGCAGAACTC CCTACCAAAC
  AGCACGGACC TGGGGCCAGT CCACAGGAGT GTGCATGTGA GAGTTCTAAC TTCCTGGCTG
  R
  TGCTCATGGG GCATACTTTG CTCCCAAGGC TGTCCTCCAG CTCAGTAGGC CCGGGAATGT
  CTCTTAAGTC CTGTCATCCT GTCCTTTTCA GTTCTTTCCT TAGGCAGAGC CCTCTCTAAG
  TAGTAACAGC ATCCTTCTTC CAGCTTTGCA CTCATTTCAG AAACGGACAC TAGGGGGCAG
  TCATCAGACA TAGCACAGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ
ss61796096	NES17726128	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ
rs51130482					SNP	A	A	G	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61796096	NES17726128	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:52866015 () rs orientation: forward

Symbol	Name	Function Class
Rr479878	regulatory region 479878	within coordinates
Rr479879	regulatory region 479879	163 bp proximal