rs51130516 SNP Detail

Summary

• ID
  rs51130516
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:130089861 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      T TCGAAAGGGG AACAAAATAC TAACAGAAGC AAATTCGGAG
  ACAATGTGTG GAGCAGAGTC TGAAGGAAAG GCCATCCAAA GAATGCCCTA CCTGAGGACC
  A
  ATCCCATATA CAGTCACCAA ACCCAGACAC TATAGCTGGT GCCAAGAAGT ACTTGCTGAC
  AGGAGCCTGA TATAGCTGTC TCCTGAGAGG CTCTGCCATA G                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss134318127	ENSMUSSNP3185868	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs51130516					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:130089861 () rs orientation: reverse

Symbol	Name	Function Class
Thsd7b	thrombospondin, type I, domain containing 7B	within coordinates
Tssr8552	transcription start site region 8552	1703 bp upstream
Tssr8553	transcription start site region 8553	1732 bp upstream