rs51132186 SNP Detail

Summary

• ID
  rs51132186
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:16194697 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTTCTT TTCTTTATAA
  CCATTTGGAC AACATAGGGT GCAGTCAATG ACTGTTACCT GTAAACATAC TATAGATGTG
  CTTTTCAATA GCAAGATCCC TGGTATGGGA ATGTATGTTT TACTTTGGCC TCTTCACTCA
  AGATTATTAG ATAAAGCTGA GAAAAACATG AGACTGAAGG GACTGTAAGG GCTGTGGTAC
  Y
  CTGACCTTTT AAGTGAATTT GTCCTGTGTT CAGGTGGGAA GTATTTTGGT TTTGTGAAGT
  TGATTTGAAT TGCATTGGCT AAGCAGCAGA TATTCACTCT CAAGCTCCCT GCAATCTGTC
  CCAATAAGTG AAATTGATTT TATTTTTATA AGTGTCACCC AAGAGTGCTT CCCAAAGTTA
  GCATATTTAT TGCATGACTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52620135	NES15517412	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	T	T	T	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51132186					SNP	T	T	C	T	T	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52620135	NES15517412	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:16194697 () rs orientation: forward

Symbol	Name	Function Class
Inhba	inhibin beta-A	within coordinates
Tssr118443	transcription start site region 118443	1995 bp downstream
Tssr118444	transcription start site region 118444	1934 bp downstream
Tssr118445	transcription start site region 118445	177 bp downstream
Tssr118446	transcription start site region 118446	1561 bp upstream