rs51144875 SNP Detail

Summary

• ID
  rs51144875
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121615093 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGGGAAGAT AGCTCAATGA GTAAAGTGAC TGCTGTAAAG
  TGTGAGGACG TGAGTTTGAA TCCCCAGACC CAGGTAACAC AGCACACGGT AGCATGCCTA
  W
  AATCTGAGCA CTCTTACTTC AGGATGGGAG ACAGAGACAG GAAAAATCCA GAAACCCACC
  AGCCAGCTAG CCTGACAGAC AGTAGAGGAC AGAAAGGGG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135729798	ENSMUSSNP6218058	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51144875					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121615093 () rs orientation: forward

Symbol	Name	Function Class
D3Mit347	DNA Segment, Chr 3 Massachusetts Institute of Technology 347	1621 bp proximal
Gm42776	predicted gene 42776	2000 bp downstream
Rr584177	regulatory region 584177	627 bp distal
Rr584178	regulatory region 584178	291 bp proximal