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rs51148659 SNP Detail
Summary
  • ID
    rs51148659
  • Variation Type
    SNP
  • Alleles
    G
Genome Location and Flanking Sequence
  • Location
    Chr5:144177776 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GATTAAAGGC GTGCACCACC
    ACACCCAGCT CAGCCTGCTT TCTTTTTCTT CCTTCCTTCC TTCCTTCCTT CCTTCCTTCC
    TTCCTTCCTT CCTTCCTTCC TTCCTTCCTT CCTTCCTTTT CTTTTTCTTT AAGATTTCTT
    TATGTGAGCA CACTGTTGCT CTCTTCAGAC ACACCAGGAG AGGTCACCAG ATCCCATTAC
    G
    GATGGTTGTG AGCCACCATG TGGTTACTGG GAATTGAACT CAGGACCTCT GGAGGAGCAG
    TCAGTTCTCT TAACCACTGA GCCATCTCTC CAGCCCTCAG CCTGCTTTCT TACACAACCC
    AGGACCACCT GTCCAGGAAT GACACTGCCC ACAGGGGCCC TTCCCCGGCA AAAATTAACC
    AAGACATGTA CCCTACAGAT                                            
    
    G = G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
ss144609008 ENSMUSSNP1238369 ENSEMBL ENSEMBL_Sanger f SNP G
SNP Consensus Information
SNP Consensus Type
A/J
rs51148659 SNP G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr5:144177776 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
2900089D17Rik RIKEN cDNA 2900089D17 gene 815 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory