rs51149182 SNP Detail

Summary

• ID
  rs51149182
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50408374 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTTATTTT AAGTGCCAGA
  GACAGAAGCT AAGGCTTCAA ACATGCTGGA CAAATGCTCT ACTACTAAGC AACAGTTCGC
  CCCAGCCCTG AAGCAGGGCG TTAGAATCAA TCAAAAGTGT TTGGTGCCAA ACACTGGGCT
  GCTTGCATGC TGACTGATGA AACCATGAAA TATAATCAAG TATTCAGTCC TAGAGAAAGG
  M
  TGTGAATGTT TCAGATATGA GGAGGAAAGA GGGTAAGCTA ATCCAGAGGC GGGGATGTGA
  GCGAGATCTG GCTGTGGAAG TGGGTATGGG ATGAATGCTA ACAGGGAAGG AAGGTTCCAG
  ACAGGCTGCA GACGTGAACA AACCAGGCCC AGGTGTGGGT CAGATAAGAG CCAGGTGCCT
  TTGCAGAACA GCTGGGGGCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136476469	ENSMUSSNP1809474	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51149182					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50408374 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21724	CpG island 21724	1824 bp proximal
Plet1	placenta expressed transcript 1	within coordinates
Plet1os	placenta expressed transcript 1, opposite strand	within coordinates
Rr678655	regulatory region 678655	657 bp distal
Rr678656	regulatory region 678656	114 bp distal
Tssr85026	transcription start site region 85026	273 bp downstream