rs51152228 SNP Detail

Summary

• ID
  rs51152228
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:94444622 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCCAGTGAA TCTCCGTGAG TTTGAGGCAA GCCTATTCTA
  CATAATGAGT TCTAGGACAG TCAGAGCTAT ATAATGAGAC CCTGTCTAGA AAAATAAACA
  G
  CAACAAAAAG TAATTGGCTT TGGGCCAGTG AAGTGACTCA GCAGGTATAA AGCACTTGCT
  GAGTCAGCCT GCCAGCCTGA GTTTGATCCT CACAGCCCA                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135505876	ENSMUSSNP91267	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51152228					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:94444622 () rs orientation: forward

Symbol	Name	Function Class
Gm43773	predicted gene 43773	1349 bp upstream
Gm43774	predicted gene 43774	within coordinates
Rr375397	regulatory region 375397	within coordinates
Snx27	sorting nexin family member 27	Intron