rs51154982 SNP Detail

Summary

• ID
  rs51154982
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:89313933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGAGTAGG AAGTAGGTGC
  CTGTATTTAG CTTGTCATTT TGATACACTA TCCTTTTCAA GGCAATTTTC AAAATATTAT
  GCTGCCTCCC CCAAAATCCA TTTATAGACA TTTTTTCTCC TGTAACTAAA GTCTGGCAGG
  GACTTTTTAT AGTAGTTCTT GTAAGCACTA GGCACTATTA TAAATTACAT TTATGAAGAA
  Y
  AGATGACGCC ACTGACAAAC GTTCCTACTA TAAGTTACAA TGCAGCATAA ACCTGGTTAT
  CGAGGCTTTG TCCTCCTTGA AGAAAAGCAT TAAGCTGTGT CAGTAAATGA TATCATTTTA
  AGCTAGAAAA GAGGCTGAGA TACAGCATAG GAAAGCCTCC AAGAGATTTA GATAGACGAT
  GTGGAAAGTA AGAGGCCCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148517899	ENSMUSSNP2672453	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51154982					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:89313933 () rs orientation: forward

Symbol	Name	Function Class
Rr319439	regulatory region 319439	468 bp proximal
Rr324507	regulatory region 324507	691 bp proximal