rs51156545 SNP Detail

Summary

• ID
  rs51156545
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:111860058 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTAAAGGAG ATAGTAAGAT
  TAAATACACC TTGAACATTT TGCTCTGAAT CATTCCAAGA ACTCAGTGTT GCATGCTTGG
  TGACTTAGAT TTTCAAAGCC AAGCTCTAAA ACACTGTTAC ATGTGAGCAA ACAGACTTGC
  AGGGACTCTT TGAGTATATT TGCTTTTACT GTCTAGCATG ATTTAGGTAA TTTGTCCTAT
  W
  CACTTATATG TATAAATAAT TTTCTTTAAT CACCTACTGT TATTCAGGTT TTGGAGATGA
  TGGCATTACA GTGAAGTGCA AGATTGTTAG CTGTCAATAT TTATGCAAAA TAAAAATCAT
  ATTCAATGCA TTTTAAAGTT TTCTTCATAA TTTTATACCT CTACTCTTGA TATCTTTGTC
  TTTGTTTGAT ATTTGACTAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss134277722	ENSMUSSNP5601310	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss325913347	CHEV_X_110063970	CHEVERUD	SCREENING_POP	f	SNP		A	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs51156545					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:111860058 () rs orientation: forward

Symbol	Name	Function Class
Rr2637	regulatory region 2637	58 bp distal
Rr6449	regulatory region 6449	306 bp distal