rs51157010 SNP Detail

Summary

• ID
  rs51157010
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:79194194 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGATCAAAT GAGGGCCATG
  AGAATTTCTA CACATGTATT TTTGCCCTGA AAACCACTTA ATTACTTTAT ATCCTAATGA
  GTTTTTTATT CTAATTCCAC TTTATAATTT TGAGATTATA AAGTGCTTGC TACCTATTTG
  GTGATTCTTA GGTTAATAAT ATCTCTGGAT TTCATGTCCA ACGTGAAGCT TCTGGAAAAT
  R
  GTGTTCATAA AAGGGCTTAC CTTGCTAGCA GGTGACATGT GGAACTGTGG TCGGACAAAA
  TGAGTATGAC GTGTCACCAC TTTGTCCCAG GTAATTACTT GTAGCCCAGG CCAGTAGACG
  TTGGAATGGC ACAAATGGTT CATTCTGTTG TTCTCCATCT GTTGCAGGAT GCCACCTAAA
  AGACTTTGGA GACTTGAGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss61653314	NES17602408	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs51157010					SNP	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61653314	NES17602408	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:79194194 () rs orientation: forward

Symbol	Name	Function Class
Arg2	arginase type II	Intron
Gm40462	predicted gene, 40462	within coordinates
Tssr114084	transcription start site region 114084	1563 bp downstream