rs51157768 SNP Detail

Summary

• ID
  rs51157768
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:80913980 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GATATTAACT GCATAATAGC ATCTGGGTCA GGTGGGAGGC
  TGCAAGGGCA CAGCTACAGA ATGTGGTCCA TGGGATGTTC ACATGGGAAG AAGCCAGGGC
  C
  TTTTCCTGCT AGTCAGACAC GCCTGTGTGA TTCCCAGTCA CTTGGAGCTG TTAGAGGAAG
  TGAGAAGAGG AAATGGCCAT TCTGATCCCA CATAGATGGA T                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137917876	ENSMUSSNP3288415	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51157768					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:80913980 () rs orientation: forward

Symbol	Name	Function Class
5830400J07Rik	RIKEN cDNA 5830400J07 gene	922 bp downstream
Rr261581	regulatory region 261581	within coordinates
Rr261582	regulatory region 261582	1021 bp proximal
Susd6	sushi domain containing 6	within coordinates