rs51158601 SNP Detail

Summary

• ID
  rs51158601
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121614642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAGCACTG AGCTACATCC
  CCAGCCTCAG TGGGTGGGGG AGGAGGAGAG GCCAGGTGGT TTTAAAGTAA AATTTATACA
  GCATTCAATG GACTCTTTAT TATTTTCATT TTTATGTATT TTTAAAACTA TTGACCATAG
  TTTTGCCAAT ATAACTGCAT TTTATAGTGA TACATTTTGA GATAAGACAT ATAAACTGTC
  Y
  TATAACGACA TGTGCCAATA TGTTAACTCA TACGGAACTA TCCAATTTGT GTAGGTAATA
  AATTGGTTAA AGACTTATTA GTGGTTATTG TTGTTATGGA GAAAAGACAG AACTCAGCAG
  ATGAAGAGGA CACAGGACAT CTGAGGATGA GTGTAGTAGC AGGCACTCTC AGGGGCCTGT
  TATATTCTGA TTTAGGAAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135729765	ENSMUSSNP2598516	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51158601					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121614642 () rs orientation: forward

Symbol	Name	Function Class
Rr584177	regulatory region 584177	176 bp distal
Rr584178	regulatory region 584178	742 bp proximal