rs51158724 SNP Detail

Summary

• ID
  rs51158724
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107170701 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCCTCGTA AAGATATGCA
  TCCCAGTATC ATCACAACTT AAGTTTCAAC AAGTTTTGGA CAGAGAATAC ATTTAAAAAT
  ACATCAGGGT TTCATGTCCG AGCAATGAAG CAGCAGAAGG GATCCAAATT GACCTCTAAG
  TCTATCATGT AAGACCTCTG GGTCAGAGGG AAAGTAGCTT CCATCTCATT TTCCATGGTG
  M
  GAATGTCGTC GTCTAGGGCC CCATTAGAAC CACAGAAAGT AGCAGGTGTG TGGTCAGCTT
  CCCCGATTCT ACACTGTCCC TCGGCTCGCG CTCAGCTCTT CCCGGTTTCG CTGTCTTCCA
  CAAGGTCCTC AGGAATACCT GTGCACATGT GCAATAGCAG CCATTCCTAT GGCTGAAATT
  TGGTAGAGAT GAAACCGCCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61696330	NES17647283	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51158724					SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61696330	NES17647283	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107170701 () rs orientation: forward

Symbol	Name	Function Class
D12Mit122	DNA segment, Chr 12, Massachusetts Institute of Technology 122	1156 bp distal
Gm5187	predicted gene 5187	634 bp downstream