rs51159241 SNP Detail

Summary

• ID
  rs51159241
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:64596724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGGGTCTA GTACTGGAAA
  AGAAATAGAA ATAAAAGCAA GTACTGACAA AAGAGATGTG TTGCTTAGTA CACACATAAA
  TGAAAGCATG CAGGATTTGT TTTTGTTTTG AAAAGAATTC CAGTGTTGAG GTTCAACAGT
  ATAAGGGGAG ACCTAAATGA AAATATCTGG GTTTTTAATT GTGGATAAAT ACATTTCAAA
  W
  TAAGTTTGTA TGTTTTAGTT TAAGAAAATA AAAAGAAGGT AAGAAGAGGT AACAAATGTG
  TCCCACTGCT GAAAGTGTGC AATGTGTGAA AGGAAGCCAA TCTAACTGCA AAAGTCTGTG
  CTCTGTGGAC ACCAGAGCCT CTCTGTGTCT GTGTGCGTTC ATGTGTAAAC AATCACAGTG
  GGAGTTATCC GTTAGAAAGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss145835100	ENSMUSSNP5334195	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs51159241					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:64596724 () rs orientation: forward

Symbol	Name	Function Class
Pja2	praja ring finger ubiquitin ligase 2	within coordinates
Tssr149038	transcription start site region 149038	316 bp downstream